江苏省260株结核分枝杆菌Spoligotyping基因分型研究刘巧许卫国万康林王建明杨丹丹吕冰邵燕汪华 [摘要] 目的 研究江苏省结核分枝杆菌DNA指纹图谱的分布特征,分析北京家族株与结核分枝杆菌耐药的关联性。
方法 江苏省30个耐药监测点收集260株结核分枝杆菌分离株,应用比例法检测分离株对于一线抗结核药物(异烟肼、链霉素、利福平和乙胺丁醇)的耐药性,应用间隔区寡核苷酸分型( Spoligotyping)方法进行基因分型,使用BioNumerics 5.0软件进行聚类分析,并与SpolDB4数据库比对。
结果 260株结核分枝杆菌分离株可分为34个基因型(27个独特基因型和7个共享基因型),菌株经聚类分析分为两个家族:北京家族(80.4%,209/260)和非北京家族(19.6%,51/260)。
logistic回归分析显示,北京家族株能增加结核分枝杆菌耐多药的发生风险(OR= 11.07,95%CI:1.45~84.50)。
非北京家族包括T1、T2、H3、H4、CAS、LAM、U和MANU2,其中CAS、LAM和MANU2家族在中国比较罕见,在江苏省是首次报道。
结论 江苏省结核分枝杆菌流行株具有明显的基因多态性,其主要流行型为北京家族,且该家族可能与结核分枝杆菌耐多药之间存在关联。
结核分枝杆菌;基因分型;北京家族Study on the genotypes of 260 Mycobacterium tuberculosis isolates by Spoligotyping method in Jiangsu province, China LIU Qiao1XU Wei-guo2WAN Kang-lin3WANG Jian-ming1YANG Dan-danLV Bing3SHAO Yan2, WANG Hua11 Department of Epidemiology and Biostatistics, School of Public Health, Nanjing Medical University, Nanjing 210029, China; 2 Department of Chronic Communicable Disease, Jiangsu Provincial Center for Disease Control and Prevention; 3 State Key Laboratory for Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention This work was supported by grants from the National Science and Technology Key Program of Mega Infectious Diseases (No. 2008ZX10003-010) and National Science and Technology Major Project of China (No. 2009ZX 10004-904 ). [Abstract] Objective To study the genotypes of Mycobacterium tuberculosis (M. tuberculosis) strains isolated from Jiangsu province and to explore the relationship between the 'Beijing family' and the drug resistance of M. tuberculosis. Methods Two hundred and sixty M. tuberculosis strains were isolated from 30 drug surveillance sites in Jiangsu province. Susceptibility of the isolates to the first-line antituberculosis drugs (isoniazid, streptomycin, rifampicin and ethambutol) was tested by using the proportion method. Molecular typing of M. tuberculosis strains was determined by Spoligotyping and analyzed with BioNumerics software. Results Based on Spoligotyping fingerprint, 260 strains showed 34 different genotypes, including 27 exclusive genotypes and 7 shared genotypes. These strains could be clustered into two groups:the Beijing family (80.4%, 209/260) and the Non-Beijing family ( 19.6%, 51/260). Data from logistic regression analysis revealed that infection by the Beijing family was related to an increased risk of multi-drug resistant M. tuberculosis, with the OR (95% CI) of 11.07 (1.45-84.50). Non-Beijing families including T1, T2, H3, H4, CAS, LAM, U and MANU2 families were also found. Among them, the CAS, LAM and MANU2 families were first reported in Jiangsu province. Conclusion It was revealed that the marked gene polymorphisms did exist in M. tuberculosis strains. The Beijing family had been the predominant strain circulating in Jiangsu province,which might be related to multi-drug resistant M. tuberculosis strains. Mycobacterium tuberculosis; Genotyping; Beijing family 10.3760/cma.j .issn.0254-6450.2011.12.016国家科技重大传染病专项( 2008ZX 10003-010);国家科技重大专项(2009ZX10004-904)作者单位:210029 南京医科大学公共卫生学院流行病与卫生统计学系(刘巧、王建明、汪华);江苏省疾病预防控制中心慢性非传染病防治所(许卫国、杨丹丹、邵燕);中国疾病预防控制中心传染病预防控制所传染病预防控制国家重点实验室(万康林、吕冰)结 果讨 论・1253・@@[ 1 ] Wan KL. 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Lancet Infect Dis, 2010, 10: 103-111.2011-06-28江苏省260株结核分枝杆菌Spoligotyping基因分型研究作者:刘巧, 许卫国, 万康林, 王建明, 杨丹丹, 吕冰, 邵燕, 汪华, LIU Qiao, XU Wei-guo,WAN Kang-lin, WANG Jian-ming, YANG Dan-dan, LV Bing, SHAO Yan, WANG Hua作者单位:刘巧,王建明,汪华,LIU Qiao,WANG Jian-ming,WANG Hua(210029,南京医科大学公共卫生学院流行病与卫生统计学系), 许卫国,杨丹丹,邵燕,XU Wei-guo,YANG Dan-dan,SHAO Yan(江苏省疾病预防控制中心慢性非传染病防治所), 万康林,吕冰,WAN Kang-lin,LV Bing(中国疾病预防控制中心传染病预防控制所传染病预防控制国家重点实验室)刊名:中华流行病学杂志英文刊名:Chinese Journal of Epidemiology年,卷(期):2011,32(12)本文链接:/Periodical_zhlxbx201112016.aspx。